Insertion junction: CLIP2.041824_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041824
Chromosome:chromosome 17
Location:5056490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g736150 POL1C,POL1-2 DNA polymerase I, probably mitochondrial; (1 of 5) PTHR10133 - DNA POLYMERASE I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCCGCAGGGTGGTGCGGTCGTCGCGGTCCACCCCCCGCCACCCCGC
Internal bar code:TCTGAACGATTTCGCGATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTCTTCGCCACGCTATA
Suggested primer 2:GTCACAACAGGCTTGGCTTG