Insertion junction: CLIP2.041828_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041828
Chromosome:chromosome 13
Location:3040742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584400 FAP189 Coiled-Coil Flagellar Associated Protein 189; (1 of 1) PTHR32083//PTHR32083:SF31 - FAMILY NOT NAMED // COILED-COIL DOMAIN-CONTAINING PROTEIN 147 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTTTGGCCACATGACGCGGCCTGCCAGCGTGGCAGACTAGAGCACA
Internal bar code:CCCTTGTGGCAACATTACCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4628
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCACGTCGATGTTGGA
Suggested primer 2:AGGAGCGGGAAAAGTACAGC