Insertion junction: CLIP2.041830_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041830
Chromosome:chromosome 5
Location:2878122
Confidence (%):40
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00174559

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCAAGGACCTATGCTACCACTATACCACTAGTGCTAACTGATGACAA
Internal bar code:CAAATATCTATTTGCACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2665
LEAP-Seq percent confirming:32.6531
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTGGGTGGATTCCGCAT
Suggested primer 2:AGTGGTTAGTATCCCCGCCT