Insertion junction: CLIP2.041833_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041833
Chromosome:chromosome 16
Location:5807615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680100 (1 of 1) 2.1.1.177 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase / rRNA large subunit methyltransferase H intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGATGGGCGCGGCGGCACGACGCACGCAACCCATATGCAGTCAGACAT
Internal bar code:TGATGTAGGTTGGGTTAGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CATACGGGCTCGGTAGACAC
Suggested primer 2:CCCCATGTGGCACTCAAGAT