Insertion junction: CLIP2.041834_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041834
Chromosome:chromosome 9
Location:1733884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398400 TRP5 Transient receptor potential ion channel protein; (1 of 46) PF00520 - Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCTGACAGGTCAAATGGACAAACTAGGGGAGTCCCGTCGTACGGGC
Internal bar code:ACCGCCGTTATGGGGCCTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3565
LEAP-Seq percent confirming:96.1039
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACAAGCTAGCTCTGCT
Suggested primer 2:GTCAAGCCTTCCCCTCACTC