Insertion junction: CLIP2.041837_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041837
Chromosome:chromosome 12
Location:6960306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g561150 (1 of 60) IPR001611 - Leucine-rich repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTCACGCATGCCGATGCAGTTACTTCATAGTAGCATTACGGCACCAA
Internal bar code:CTAATGGCGAGCCTGCCCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1358
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CATTACACCGTGGAGGGCTT
Suggested primer 2:AGGAGCAGTTCATGTCCACG