Insertion junction: CLIP2.041841_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041841
Chromosome:chromosome 1
Location:4130141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027450 TRX10,TRL1 (1 of 1) PTHR10438//PTHR10438:SF126 - THIOREDOXIN // THIOREDOXIN; Thioredoxin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCTGCTCCCAGGCCCCCCAACCCAGCCGCCAGCTCCGCACCGTGTTG
Internal bar code:AGTGTGCCATCCACGGTAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGACTACGCGAAAACCCC
Suggested primer 2:TACGAGGAACTGCAAACGCT