Insertion junction: CLIP2.041841_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041841
Chromosome:chromosome 4
Location:2956730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATACGGCTGCTGTCTTCAATCGTCGGGTGCGGTCAACTTGCGCTTTG
Internal bar code:ACACGTGCTACATGGCAATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCGTTGTTGTGCACAAG
Suggested primer 2:CGGCAGCTGCAATGGAATAC