Insertion junction: CLIP2.041846_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041846
Chromosome:chromosome 17
Location:167954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697000 (1 of 2) PTHR23155:SF401 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACATATACACACCTCGCCCTCCGCTCTTCTGTATTGGCTTGGGT
Internal bar code:TATGCAGTGGAAATACTTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCACGTAACGTCGACT
Suggested primer 2:TAGGGGACATGTAGCGGTGA