Insertion junction: CLIP2.041851_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041851
Chromosome:chromosome 16
Location:4850354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687301 SRH26 (1 of 1) K15192 - TATA-binding protein-associated factor [EC:3.6.4.-] (BTAF1, MOT1); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAGACGGTCGACATGGTGCTTCATTAATGCGCACGCAAGCATACAA
Internal bar code:CGGGATGAATGTGAAGGGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACACAAACGCTCAACTCGC
Suggested primer 2:CACCATCACCCAGTTCCCTC