Insertion junction: CLIP2.041854_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041854
Chromosome:chromosome 3
Location:3989040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800325 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGCCTAGGTCGGTCGCAGGCGAGAGGTCGAGGAGTGTGTTGGCAGCC
Internal bar code:TAATCCTAGTGGATTACACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGGTCAAACAGCAACAG
Suggested primer 2:AGCTGGTCTCCAAGCATGAC