Insertion junction: CLIP2.041860_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041860
Chromosome:chromosome 15
Location:1814854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141606 DHC9 (1 of 1) IPR004273//IPR013602//IPR024317//IPR024743//IPR026983//IPR027417 - Dynein heavy chain domain // Dynein heavy chain, domain-2 // Dynein heavy chain, P-loop containing D4 domain // Dynein heavy chain, coiled coil stalk // Dynein heavy chain // P-loop containing nucleoside triphosphate hydrolase; Axonemal inner arm dynein heavy chain, dynein c (monomeric) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAACTACTTCGTTGGGCTGGGGCACATACACCCCCCCTGCATACGCC
Internal bar code:TTGCACGAGCCATGCAGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:99
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCTGGCTGGACATAAA
Suggested primer 2:GGTAAGTAACTCCGTCGCGT