Insertion junction: CLIP2.041861_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041861
Chromosome:chromosome 4
Location:1881687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218200 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCTCGGCAGCACGCCGCAACTCTACCTCCACTGTGCCCCACACAGC
Internal bar code:AATTTGAGCTCTGCTCGTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2811
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACACACAATGCTGTCAA
Suggested primer 2:AATTTTGACCCGCCTTGCAC