Insertion junction: CLIP2.041861_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041861
Chromosome:chromosome 4
Location:1881687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g218200 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCGCGCACCCAAAGTGCTGCACACCGCCTCCTCTGCCAGGGTGCTGC
Internal bar code:GGGGAGTGGATCAAGAATTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:667
LEAP-Seq percent confirming:35.5932
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:AATTTTGACCCGCCTTGCAC
Suggested primer 2:CGCACACACAATGCTGTCAA