Insertion junction: CLIP2.041873_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041873
Chromosome:chromosome 1
Location:3853480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025350 FAP235 (1 of 3) PF03703 - Bacterial PH domain (bPH_2); Flagellar Associated Protein 235 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATGTCGGCATGTGTCAGCTGCGCAAGCTGGCGCACCCTCCAGGACAG
Internal bar code:GGGTATAATGGGATTAGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1797
LEAP-Seq percent confirming:3.25203
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:119
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCATGACAGCGTAATG
Suggested primer 2:ACTGTGGACGGCTTACTGTG