Insertion junction: CLIP2.041876_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041876
Chromosome:chromosome 13
Location:702609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566450 ROC104 (1 of 66) 2.7.12.1 - Dual-specificity kinase; Rhythm of Chloroplast bioluminescence 104 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTTACGGCAAGCAGTTACACAGCAAACATTACGTACACCACACCTG
Internal bar code:GAGGTAGGGGAGCACGGGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGCCCACCTTTAGGAAT
Suggested primer 2:GAGACTCTCGTAGCGTCACG