Insertion junction: CLIP2.041878_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041878
Chromosome:chromosome 5
Location:1886785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGAGAGGGCGGCGGTGGTGCTGACCCAGGCAGGGGCGGAGACGAGG
Internal bar code:CCATGGTCTGACGATTACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2133
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCGAAGCAACCAAAGC
Suggested primer 2:TCACCTGCTGTGCAAGGTAG