Insertion junction: CLIP2.041896_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041896
Chromosome:chromosome 17
Location:5957442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742200 (1 of 1) PTHR22870:SF220 - RCC1 AND BTB DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGAGGCCGGGACCACCTCCCGATCGCCGGCGAATCGTTGTGCCGGAGC
Internal bar code:CCACGGTTGCCCGCTACCTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCACGTGTTGAGACCAT
Suggested primer 2:CACGCCTTGAGTGTCACTCT