Insertion junction: CLIP2.041901_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041901
Chromosome:chromosome 9
Location:5270596
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407150 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCATGCAGCCGGCAGCCGCGTCCGCATCGGCGCCGTACCCATGCGGA
Internal bar code:CATGCTTCTAGCTTCGCGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:692
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGAGTGAGTGTGTTCTGA
Suggested primer 2:CTCTCTGTCTTGGGTGGCTG