Insertion junction: CLIP2.041907_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041907
Chromosome:chromosome 3
Location:7429285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206000 (1 of 1) PTHR16301//PTHR16301:SF2 - IMPACT-RELATED // PROTEIN IMPACT HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAATGAAGCGCGCAGGTGCATACCGGTACTAGAGCGGCAGGGCCATAG
Internal bar code:TCATAGTGTGCGGGGTTCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:616
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGGCATGGGTTGTAGG
Suggested primer 2:CGCCACTGCATACGGTATCT