Insertion junction: CLIP2.041912_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041912
Chromosome:chromosome 12
Location:1640717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486700 FAP271 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 271 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGTCCAGAAGGCCCATCGCCGACCCCTTCCGGCTTCCCAAATAGGT
Internal bar code:TATATGTAAGGGGAATACCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGAAGGGGTTCAGCGTG
Suggested primer 2:GCTCCACATACCCAGATCGG