Insertion junction: CLIP2.041923_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041923
Chromosome:chromosome 9
Location:4860090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402923 (1 of 33) IPR013830 - SGNH hydrolase-type esterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCCATGCTCCGCACCCTGGGCGCGCTAAACAACGTTTACCCAGCACG
Internal bar code:TGGCTATAGAGCGGTGGACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3824
LEAP-Seq percent confirming:86.385
LEAP-Seq n confirming:184
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:213

Suggested primers for confirmation by PCR

Suggested primer 1:TCAATCAAGGTCGCAGCCAT
Suggested primer 2:TGAACACCGAGAACCAGTCG