Insertion junction: CLIP2.041928_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041928
Chromosome:chromosome 7
Location:467563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g315500 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGTGCCGGCTGCCCTCCCCCGATCCTCCGCCGCCTCGCCCGCCGC
Internal bar code:CGTTACATAAAGTTGAGGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:947
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATATTCGCGGGCAAGG
Suggested primer 2:GAGCTTGGTCACACAGGACA