Insertion junction: CLIP2.041928_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041928
Chromosome:chromosome 8
Location:2997748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g374950 (1 of 6) PF02582 - Uncharacterised ACR, YagE family COG1723 (DUF155) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCAGCCCGCTTGCCCAGCCCCGCCTTCCAACACGTGGCCTCCTGC
Internal bar code:AGCGGGAAGGTTAAGTCGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3405
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGCATTACATGAAGGCAG
Suggested primer 2:CCGTATATGCGAGCTGTGGT