Insertion junction: CLIP2.041929_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041929
Chromosome:chromosome 9
Location:1197734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400950 NCT2 (1 of 2) PTHR11662:SF3 - INNER MEMBRANE TRANSPORT PROTEIN RHMT; High-affinity nicotinic acid transporter 5'UTR
Cre09.g401000 SNE3 UDP-N-acetylglucosamine/UDP-glucose 4-epimerase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGGGAGCCGCCGCCGCCGCCGCCCGCAGCAGCAGCCCCCGCATCTGA
Internal bar code:GTATGTTTATGACCCTAGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3152
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGATGGAAACCGTGCTAG
Suggested primer 2:TTCGACAGCATGCAAACTGC