Insertion junction: CLIP2.041938_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041938
Chromosome:chromosome 4
Location:1671034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212550 TTL7 (1 of 1) K06047 - tubulin---tyrosine ligase [EC:6.3.2.25] (TTL); Tubulin tyrosine ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCGGAGACGTGAAGTCGGGTTGCAAGGTAGCGGGTCGAGGTTAGGAA
Internal bar code:GGTGACTAGGCTACAACGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1679
LEAP-Seq percent confirming:67.3913
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGTTGAGCAGCCTGAG
Suggested primer 2:GGTTGCAGCCAGTTTTCAGG