Insertion junction: CLIP2.041939_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041939
Chromosome:chromosome 11
Location:1848174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467350 ACO2 Acyl-CoA oxidase/dehydrogenase; (1 of 1) PF01756//PF02770 - Acyl-CoA oxidase (ACOX) // Acyl-CoA dehydrogenase, middle domain (Acyl-CoA_dh_M) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTGAGCCAGGCTGCCGGGCGTGTTGATCACAAACGTCTGCGTGCCGA
Internal bar code:TGATGTGGTGGCGTGAATAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCGTGAGAACCCCTTCC
Suggested primer 2:CCTAGACCCTAACCCCAGCT