Insertion junction: CLIP2.041941_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041941
Chromosome:chromosome 11
Location:3277601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476376 FAP221,Pcdp1,RPC82 Flagellar Associated Protein 221; (1 of 1) PTHR23053//PTHR23053:SF21 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGAGAGAGAGAGACGGAAAGCGAGAGGGATACTTATGCAAGGGCGGC
Internal bar code:ACTACACGATGCAGTGACGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:970
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTGCGGTTGCCTTTAA
Suggested primer 2:TGTCAGGCACATACACACCC