Insertion junction: CLIP2.041943_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041943
Chromosome:chromosome 2
Location:5708190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116300 (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCGGGTGTCAGGGGCTGTTGGCAGGGGCTGCGGGGCGAGGTTGGGGC
Internal bar code:ATAACAAGAACTGGTTCAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAAGTTACAGCCAAGCC
Suggested primer 2:CGAATACGCTGCTGTGAACG