Insertion junction: CLIP2.041943_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041943
Chromosome:chromosome 2
Location:5708201
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116300 (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCCGCCAAGCCTCAGGCCCCCGGGGCGCTCGGCTGTGTGTGTGCGCC
Internal bar code:ATAACAAGAACTGGTTCAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1581
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATACGCTGCTGTGAACG
Suggested primer 2:AGGGAAGTTACAGCCAAGCC