Insertion junction: CLIP2.041944_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041944
Chromosome:chromosome 10
Location:6435313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464800 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCACGGACGTGGGCAACGGCACGCACCACTCCTGTAACGAGTGAG
Internal bar code:CGGGTCAGTGAGTGTGGTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTTCTCCGCTGCTGCTA
Suggested primer 2:TCAACCACGACCTGCTGTAC