Insertion junction: CLIP2.041946_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041946
Chromosome:chromosome 8
Location:3886432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381900 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTTCCACGTGTACTACAAGGGTAGGTGGTGCAAGGTGGTTGCTTAAG
Internal bar code:CTCACGCGCCTATGTTTAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:57.5758
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTGCTACTGCTACTG
Suggested primer 2:CGGTAGTGACGATGACGGAG