Insertion junction: CLIP2.041946_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041946
Chromosome:chromosome 8
Location:3886440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381900 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCACGTCTTGCGCAGCGCCAGCTCCAGTGGCGGCGACGGCGGCGGCG
Internal bar code:GGTTCCACGTAAAAGGCCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:423
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAGTGACGATGACGGAG
Suggested primer 2:TGCTGCTGCTACTGCTACTG