Insertion junction: CLIP2.041950_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.041950
Chromosome:chromosome 13
Location:3857963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589500 PTK9 Protein tyrosine kinase; (1 of 2) PTHR23257:SF428 - INACTIVE SERINE/THREONINE-PROTEIN KINASE DDB_G0280131-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACATGCTAATTCTTGTCGATTGGGCTTTGATGGGCAGACGGTTGA
Internal bar code:TTGATCGACTTGGTTGTCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2681
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCCTTGTGTGTTTGCG
Suggested primer 2:GTCCGACAGAGGTGGAGTTG