Insertion junction: CLIP2.041952_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041952
Chromosome:chromosome 6
Location:711823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g254700 (1 of 1) K18716 - nucleoporin NUP42 (NUP42, RIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCTATATGTCCTTTGTACGTCCTTTGCACCGCTACAGTGACGCTGC
Internal bar code:GTCATCTGTCGCGGTCGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGACTCGAGATCGGACA
Suggested primer 2:GCGAAAGGTGCGTGGTAATG