Insertion junction: CLIP2.041953_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041953
Chromosome:chromosome 9
Location:2442043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393450 FAS10,FAP233,FLA5 Flagellar Associated Protein 233; (1 of 21) PF02469 - Fasciclin domain (Fasciclin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAACTAAGAATCCTAGGAGTTGGGCATGCCGCGTGCAGCTAGTGCAA
Internal bar code:TGGGCCGAGGGAGAATGAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:800
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGGGGAACTTGACGTA
Suggested primer 2:GTCCTAGTCGTGTTGCCCAA