Insertion junction: CLIP2.041957_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.041957
Chromosome:chromosome 4
Location:2109253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g219725 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCAAGCGGGCTGTGGCTCCAAAGCTGTCTCACTCACCCGGTCCCGT
Internal bar code:TTGAGGACCGGTGATAGCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1606
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGAAGCCTCGTACACG
Suggested primer 2:GTCCTTCGTCCCTAAGCACC