Insertion junction: CLIP2.041963_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041963
Chromosome:chromosome 12
Location:2344634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508050 (1 of 1) PF01388//PF12047//PF15612 - ARID/BRIGHT DNA binding domain (ARID) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGCAGGACACGCCCTTCGTGTTGCCGCAGCTCGTGGCATGGGTGAAG
Internal bar code:TTCCAAATCTGGAAGGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5208
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTCATCGTAGTCGTCG
Suggested primer 2:ACGACGATTGTCACGGTTCA