Insertion junction: CLIP2.041963_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041963
Chromosome:chromosome 12
Location:2344647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508050 (1 of 1) PF01388//PF12047//PF15612 - ARID/BRIGHT DNA binding domain (ARID) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACAGTTTGGCTGTCGCCCGGCTGCTGGCCGGCTTGCAGCAGGGCCG
Internal bar code:TTCCAAATCTGGAAGGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1532
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACGATTGTCACGGTTCA
Suggested primer 2:CCCAGTCATCGTAGTCGTCG