Insertion junction: CLIP2.041965_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041965
Chromosome:chromosome 3
Location:6041626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190000 PPP14 Phosphoprotein phosphatase 2C-related; (1 of 70) 3.1.3.16 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCAGCAATCAGCACAGATATATGATATTTAGCTGGCAGCACCATTCG
Internal bar code:AGGCGGTAGTTATGTGGCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTGCCATCCCCACTTAC
Suggested primer 2:ATATGCCCCATGCCCATACG