Insertion junction: CLIP2.041968_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041968
Chromosome:chromosome 12
Location:2611396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506250 HTA18 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGCCGGCCTTGGCGCTGCGGCTCACGGCCTTCTTGCCAGAGGTCTT
Internal bar code:ATTGAGGTACATTAGGGTGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2677
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTTCTTGGGAGCCATT
Suggested primer 2:CGCAGTGAAAGGTGGTGTTG