Insertion junction: CLIP2.041971_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041971
Chromosome:chromosome 1
Location:4919857
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g034150 (1 of 1) PTHR10110//PTHR10110:SF86 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 7-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATCGGTAACAACGCGGCTGCTATACTACTGTACCTGGCTCATGAAT
Internal bar code:TTGTTCGTTTGACCGGGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:151
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAATGGCCTTGTACATGG
Suggested primer 2:TTGCCACGTACTGGTAACCC