Insertion junction: CLIP2.041972_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.041972
Chromosome:chromosome 17
Location:529267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699400 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGGTGGGGGCTTGCGCAGCGGTGGCGGCTGCCTGCTAGCTGCCTATT
Internal bar code:TCGTATATGTCTGTGCAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCACCCCATCCTTCAAC
Suggested primer 2:GCCAGTCAATCCAAGTCCCA