Insertion junction: CLIP2.041974_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.041974
Chromosome:chromosome 5
Location:2452873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800559 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGATGGCACCCCTTCGTCTTCGTGCCTGAAGAATTTGCGTCTCAAATG
Internal bar code:CACTCAAGTGTGAGGTCCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTCGGTTTAGGTTGGG
Suggested primer 2:CTGTAGACCAGTGTGCAGCA