Insertion junction: CLIP2.041979_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.041979
Chromosome:chromosome 13
Location:3849018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCCACACTGTAAACACCATCCCTGCACCATAGCCTCTTTGTCGCCAC
Internal bar code:TGGAGAGGCAGCAATGTTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1882
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTACGGATCTGACACG
Suggested primer 2:GAGCGCTCGTTTGCATGTAG