Insertion junction: CLIP2.041987_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041987
Chromosome:chromosome 11
Location:1344284
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801254 intron
lncRNA_TCONS_00185693 intron
lncRNA_TCONS_00186621 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAAAGGATTTTGAGCGCCTGAAGGCTTGTTTTATGAGCGTGTGTGTA
Internal bar code:TTTGTTATTTGCTATATCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2669
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTGTTGCTCAAAGTTCA
Suggested primer 2:GCTGCATTGTAGCATGGCTC