Insertion junction: CLIP2.041990_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.041990
Chromosome:chromosome 13
Location:2389179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579250 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCAGTTGCGGCAGGCCGCATTCTCTGTCATGGCAACTGTTACTCCTC
Internal bar code:AAACATATTATCCGTACGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2690
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGCGCACATGTCAAACA
Suggested primer 2:CTACTCGTGCTGGTGCTTCA