Insertion junction: CLIP2.041991_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.041991
Chromosome:chromosome 2
Location:1997764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088300 CPK6 (1 of 1) PTHR10584:SF179 - PROTEIN MAK32; putative carbohydrate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGATGCCGGGGAAAGCACGTGCCCAGACACGCCCGCCCGCACGTGG
Internal bar code:ATCTAGCGAGCCATGTTCAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTACCTGCGTAGTAAG
Suggested primer 2:CGGGTAAGTATGGTCTCGGC