Insertion junction: CLIP2.041993_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.041993
Chromosome:chromosome 5
Location:275385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243351 (1 of 3) IPR000477//IPR002156//IPR012337 - Reverse transcriptase domain // Ribonuclease H domain // Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACACTACGTTGAGGTCTACGGCGATGCAGCGGCGCACTCCGTCCCAG
Internal bar code:GTTTATGCTCGTTTTCACTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2826
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTATGGACTCTCTGGGCG
Suggested primer 2:CTTCATGCACAGCACCAACC