Insertion junction: CLIP2.042009_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.042009
Chromosome:chromosome 11
Location:1352888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACCACTCTCTGAGGACAGGTCGGCACCGCGCGTCCAAAGCACACAGCG
Internal bar code:TTAGTCGTAAACATCTTGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTCTCCTCCTCTCTGT
Suggested primer 2:CATCAGTCCACCGTCAACCA